simulator.detachment.ConnectedVolume Class Reference

Implements connected volume filtration operation. Provides a base class for geometry specific connected volume filtrators. More...

Public Member Functions
	ConnectedVolume (int nI, int nJ, int nK)
	Initialise the _cvf matrix. More...
boolean[]	computeCvf (LocatedGroup[] matrixToFilter)
	Implements iterative implementation of connected volume filtering. More...
boolean	validateElement (int index)
	Determine if this grid element has been validated. More...

Protected Member Functions
void	initializeCvf ()
	Initiate the cvf process. Research carrier on the padded grid. More...

Protected Attributes
int	_nTotal
int[]	gridDim = new int[3]
boolean[]	_cvf
LocatedGroup[]	_shoveGrid
int	_validateInThisIteration

Detailed Description

Implements connected volume filtration operation. Provides a base class for geometry specific connected volume filtrators.

Implements connected volume filtration operation. Provides a base class for geometry specific connected volume filtrators.

Author

*

João Xavier (xavie.nosp@m.rj@m.nosp@m.skcc..nosp@m.org), Memorial Sloan-Kettering Cancer Center (NY, USA)

Constructor & Destructor Documentation

simulator.detachment.ConnectedVolume.ConnectedVolume	(	int	nI,
		int	nJ,
		int	nK
	)

Initialise the _cvf matrix.

Initialise the _cvf matrix

Member Function Documentation

boolean [] simulator.detachment.ConnectedVolume.computeCvf

(

LocatedGroup[]

matrixToFilter

)

Implements iterative implementation of connected volume filtering.

Implements iterative implementation of connected volume filtering. Iteration stop when none grid cell has been added

Parameters

matrixToFilter

Vectorised array of space occupation matrix

Returns

a vectorized array of a boolean matrix (true for connected to carrier)

void simulator.detachment.ConnectedVolume.initializeCvf ( )

protected

Initiate the cvf process. Research carrier on the padded grid.

Initiate the cvf process. Research carrier on the padded grid

boolean simulator.detachment.ConnectedVolume.validateElement

(

int

index

)

Determine if this grid element has been validated.

Determine if this grid element has been validated

Returns

true if this grid element has been validated

Member Data Documentation

boolean [] simulator.detachment.ConnectedVolume._cvf

protected

Connected volume filtration matrix of size _nTotal.

int simulator.detachment.ConnectedVolume._nTotal

protected

Total number of elements in the grid

LocatedGroup [] simulator.detachment.ConnectedVolume._shoveGrid

protected

Shoving grid to use to determine which agents to mark for sloughing

int simulator.detachment.ConnectedVolume._validateInThisIteration

protected

Integer noting whether a grid element needs to be validated (1) in an iteration or not (0)

int [] simulator.detachment.ConnectedVolume.gridDim = new int[3]

protected

Store grid dimensions

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The documentation for this class was generated from the following file:

• /home/kieran/Dropbox/workspace/iDynoMiCS/src/simulator/detachment/ConnectedVolume.java