Interface class used by boundary condition classes. Defines the methods used to monitor the boundaries of the computation domain. More...

Inheritance diagram for simulator.geometry.shape.IsShape:

Public Member Functions
void	readShape (XMLParser shapeRoot, Domain aDomain)
	Reads the coordinates that specify a boundary from the protocol file, creating a shape. More...

Boolean	isOutside (ContinuousVector cc)
	Test if a given set of coordinates is outside this shape. More...

Boolean	isOnBoundary (ContinuousVector cC, double res)

ContinuousVector	intersection (ContinuousVector position, ContinuousVector vector)
	Calculates the coordinates of the interaction between a line (point a vector) and the plane. More...

void	orthoProj (ContinuousVector ccIn, ContinuousVector ccOut)
	Correct coordinates of a point that has gone outside this shape. More...

ContinuousVector	getOrthoProj (ContinuousVector ccIn)
	Correct coordinates of a point that has gone outside this shape, returning these coordinates. More...

double	getDistance (IsShape aShape)
	Used in cyclic boundaries - gets the distance from the opposite side (aShape) More...

double	getDistance (ContinuousVector cc)
	Used in cyclic boundaries - gets the distance from a point on the other side (ContinuousVector) More...

ContinuousVector	getNormalInside (ContinuousVector cc)
	Takes a vector and returns that vector pointing towards the inside of the shape. More...

void	readyToFollowBoundary (SpatialGrid aSG)
	Initialisation to create the features of and go along the boundary. More...

boolean	followBoundary (DiscreteVector dcIn, DiscreteVector dcOut, SpatialGrid aSG)
	Find the next valid point. More...

DiscreteVector	getNormalDC ()
	Return vector normal to the plane. More...

Detailed Description

Interface class used by boundary condition classes. Defines the methods used to monitor the boundaries of the computation domain.

Interface class used by boundary condition classes. Defines the methods used to monitor the boundaries of the computation domain

Member Function Documentation

boolean simulator.geometry.shape.IsShape.followBoundary	(	DiscreteVector	dcIn,
		DiscreteVector	dcOut,
		SpatialGrid	aSG
	)

Find the next valid point.

Find the next valid point

Parameters

dcIn	Discrete vector within the shape
dcOut	Discrete vector outside the shape
aSG	Spatial grid in which the boundary is associated

Returns: Whether a valid point was found

Implemented in simulator.geometry.shape.Planar.

double simulator.geometry.shape.IsShape.getDistance ( IsShape aShape )

Used in cyclic boundaries - gets the distance from the opposite side (aShape)

Returns: Double stating distance to that shape

Implemented in simulator.geometry.shape.Planar.

double simulator.geometry.shape.IsShape.getDistance ( ContinuousVector cc )

Used in cyclic boundaries - gets the distance from a point on the other side (ContinuousVector)

Returns: Double stating distance to that shape

Implemented in simulator.geometry.shape.Planar.

DiscreteVector simulator.geometry.shape.IsShape.getNormalDC ( )

Return vector normal to the plane.

Return vector normal to the plane

Returns: Discrete vector normal to the plane

Implemented in simulator.geometry.shape.Planar.

ContinuousVector simulator.geometry.shape.IsShape.getNormalInside ( ContinuousVector cc )

Takes a vector and returns that vector pointing towards the inside of the shape.

Takes a vector and returns that vector pointing towards the inside of the shape

Parameters

cc	Vector outside the shape

Returns: ContinuousVector that is pointing towards the inside of the shape

Implemented in simulator.geometry.shape.Planar.

ContinuousVector simulator.geometry.shape.IsShape.getOrthoProj ( ContinuousVector ccIn )

Correct coordinates of a point that has gone outside this shape, returning these coordinates.

Correct coordinates of a point that has gone outside this shape, returning these coordinates

Parameters

ccIn	Coordinates to be corrected

Returns: Corrected coordinates

Implemented in simulator.geometry.shape.Planar.

ContinuousVector simulator.geometry.shape.IsShape.intersection	(	ContinuousVector	position,
		ContinuousVector	vector
	)

Calculates the coordinates of the interaction between a line (point a vector) and the plane.

Calculates the coordinates of the interaction between a line (point a vector) and the plane. Returns null if none exists

Parameters

position	Position used to calculate the line
vector	Vector of coordinate positions used to calculate the line

Returns: : coordinates of the intersection between a line and the plane

Implemented in simulator.geometry.shape.Planar.

Boolean simulator.geometry.shape.IsShape.isOnBoundary	(	ContinuousVector	cC,
		double	res
	)

Computes orthogonal distance and if this distance is lower than the resolution and if the point is outside, then the point tested is declared to be on the boundary of the domain

Parameters

cC	ContinuousVector containing the coordinates of a point to test
res	Resolution of the domain that this shape is associated with

Returns: Boolean noting whether this coordinate is on the boundary of the domain

Implemented in simulator.geometry.shape.Planar.

Boolean simulator.geometry.shape.IsShape.isOutside ( ContinuousVector cc )

Test if a given set of coordinates is outside this shape.

Test if a given set of coordinates is outside this shape

Parameters

cc	ContinuousVector containing the coordinates of a point to test

Returns: Boolean noting whether this coordinate is inside or outside this shape

Implemented in simulator.geometry.shape.Planar.

void simulator.geometry.shape.IsShape.orthoProj	(	ContinuousVector	ccIn,
		ContinuousVector	ccOut
	)

Correct coordinates of a point that has gone outside this shape.

Correct coordinates of a point that has gone outside this shape

Parameters

ccIn	Coordinates to be corrected
ccOut	Corrected coordinates

Implemented in simulator.geometry.shape.Planar.

void simulator.geometry.shape.IsShape.readShape	(	XMLParser	shapeRoot,
		Domain	aDomain
	)

Reads the coordinates that specify a boundary from the protocol file, creating a shape.

Reads the coordinates that specify a boundary from the protocol file, creating a shape

Parameters

shapeRoot	XML elements from the protocol file that contain coordinates specifying the edge of a boundary
aDomain	The computation domain that this boundary is associated with

Implemented in simulator.geometry.shape.Planar.

void simulator.geometry.shape.IsShape.readyToFollowBoundary ( SpatialGrid aSG )

Initialisation to create the features of and go along the boundary.

Initialisation to create the features of and go along the boundary

Parameters

aSG	The grid to which this boundary is a part

Implemented in simulator.geometry.shape.Planar.

The documentation for this interface was generated from the following file:

/home/kieran/Dropbox/workspace/iDynoMiCS/src/simulator/geometry/shape/IsShape.java

Public Member Functions

Detailed Description

Member Function Documentation