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class | FirstOrder |
| Modelled First-Order reactions. This class is deprecated. More...
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class | Reaction |
| Class containing methods to create and query reactions that occur in the simulation. More...
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class | ReactionFactor |
| Allows creation of a Reaction object whose the reaction rate can be decomposed in several kinetic factors (one factor by solute) More...
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class | ReactionFactorWithConstant |
| Allows creation of a Reaction object whose the reaction rate can be decomposed in several kinetic factor (one factor by solute), but adds a constant factor to the calculation. More...
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class | ReactionGrowthFitness |
| Captures the fitness cost associated with the carriage of a plasmid. More...
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class | SingleMonod |
| Deprecated. Was used to create pathways described by a simple Monod kinetic y1 S1 -> y2 S2+X where ยต=muMax*S1/(Ks+S1) More...
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