Version 1.2 (June 2013)
 All Classes Namespaces Files Functions Variables Pages
Packages | Classes
Package simulator.agent

Packages

package  zoo
 Package of agents that can be included in iDynoMiCS and classes to store parameters for these agent types.
 

Classes

class  ActiveAgent
 Extension of Agent and SpecialisedAgent - adds reaction information to model agent involvement in reactions. More...
 
class  ActiveParam
 Extends SpeciesParam, adding parameters used to simulate an agents involvement in a reaction. More...
 
class  Agent
 Major class of iDynoMiCS - defines the agents that are involved in an iDynoMiCS simulation. Extended by a number of agent types. More...
 
interface  HasReaction
 Interface of methods that should be implemented for agent classes that are involved in solute reactions. More...
 
interface  HasSpecies
 Interface for species classes, stating the methods that these classes should include. More...
 
class  InfoAgent
 Abstract class used for declaring Episome and MultiEpisome objects. More...
 
class  LocatedAgent
 Extends ActiveAgent by adding functionality to control agent grid location, agent shoving, agent death and division, and agent movement. More...
 
class  LocatedGroup
 Object to hold a group of agents in one location on the agent grid. More...
 
class  LocatedParam
 Extends ActiveParam by adding location and behaviour parameters to a defined agent. More...
 
class  SpecialisedAgent
 Extension of Agent class, adds location and parameter information for an object of a particular species in the simulation. More...
 
class  Species
 Creates and manages the species that are to be included in an iDynoMiCS simulation. More...
 
class  SpeciesParam
 Class used to store and set parameters specific for a species. Can be extended to add additional parameters. More...