Package of agents that can be included in iDynoMiCS and classes to store parameters for these agent types. More...

Classes
class	BactAdaptable
	Creates a Bacterium agent object that can change its reaction based on local conditions. More...

class	BactAdaptableParam
	Creates a parameter object for BactAdaptable, a Bacterium agent object that can change its reaction based on local conditions. More...

class	BactEPS
	Creates an object of the Bacterium EPS Species: a bacterium with a permanent hydrolytic activity of its EPS capsule. More...

class	BactEPSParam
	Extends Bacterium Param for use by BactEPS species, a bacterium with a permanent hydrolytic activity of its EPS capsule. More...

class	Bacterium
	Creates an object of the Bacterium Species. Acts as a superclass for all current species with the exception of ParticulateEPS. More...

class	BacteriumParam
	Extends LocatedParam to create an object that can store all common parameters for Bacteria-based species. More...

class	Episome

class	EpisomeParam

class	MultiEpisome

class	MultiEpisomeParam

class	ParticulateEPS
	Creates an object of the Particulate EPS species. More...

class	ParticulateEPSParam
	Stores parameters common to the Particulate EPS species - representing generic extracellular polymers and contains only the 'capsule' type. More...

Detailed Description

Package of agents that can be included in iDynoMiCS and classes to store parameters for these agent types.

Package of agents that can be included in iDynoMiCS and classes to store parameters for these agent types. This package is part of iDynoMiCS v1.2, governed by the CeCILL license under French law and abides by the rules of distribution of free software. You can use, modify and/ or redistribute iDynoMiCS under the terms of the CeCILL license as circulated by CEA, CNRS and INRIA at the following URL "http://www.cecill.info".

Project iDynoMicS

Since: June 2006

Copyright: -> see Idynomics.java

Version: 1.0

Author: Laurent Lardon (lardo.nosp@m.nl@s.nosp@m.upagr.nosp@m.o.in.nosp@m.ra.fr); Brian Merkey (brim@.nosp@m.env..nosp@m.dtu.d.nosp@m.k, bvm@n.nosp@m.orth.nosp@m.weste.nosp@m.rn.e.nosp@m.du)

Project MicoDyna Class describing the dynamic of one kind of plasmid in a cell

Since: June 2006

Version: 0.1

Author: Laurent Lardon, DTU Denmark

Classes

Detailed Description